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Princess Margaret Bioinformatics and Computational Genomics Laboratory

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Home / Software / Software Packages and Web Applications

Software Packages and Web Applications

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  • CRAN
  • Bioconductor
  • Web-Applications
  • MetaGxOvarian

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    Collection of Ovarian Cancer Transcriptomic Datasets.

  • MetaGxBreast

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    Collection of Breast Cancer Transcriptomic Datasets.

  • CREAM

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    CREAM (Clustering of genomic REgions Analysis Method)

  • consensusOV

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    Functions for subtyping of ovarian cancer.

  • survcomp

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    Performance Assessment and Comparison for Survival Analysis

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    genefu

    Relevant Functions for Gene Expression Analysis, Especially in Breast Cancer

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    mRMRe

    R package for parallelized mRMR ensemble feature selection

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    RAmiGO

    AmiGO visualization interface in R

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    predictionet

    Inference for predictive networks designed for (but not limited to) genomic data

  • MM2S

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    Personalized diagnosis of medulloblastoma subtypes across patients and model systems

  • PharmacoGx

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    Analysis of large-scale pharmacogenomic dataset

  • PharmacoDB

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    Mine Multiple Cancer Pharmacogenomic Datasets

  • CrosstalkNet

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    Explore the interactions between tumor epithelial and stromal cells in a bipartite manner

  • DNF-webapp

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    Drug Network fusion approach (DNF) for querying, downloading and visualization of drug taxonomy data.

  • SIGN

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    SIGN: Similarity Identification in Gene Expression

Contact Us

Soleil Miron, Administrative Assistant
Phone: +1 (416) 581-7628
E-mail: Send Soleil a message.

 

Address:
The MaRS Center
TMDT room 11-310
101 College Street Toronto, ON
M5G 1L7, Canada

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